BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024B12LP1|AL428175
(1086 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1247 2027 0.0
>3x_Contig1247
Length = 7218
Score = 2027 bits (1019), Expect = 0.0
Identities = 1070/1083 (98%), Gaps = 6/1083 (0%)
Strand = Plus / Minus
Query: 1 atctgatcttaatatcttagttttcyttcttcgatatttagaatcgcattcttcctcgat 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 2865 atctgatcttaatatcttagttttccttcttcgatatttagaatcgcattcttcctcgat 2806
Query: 61 accgaacatatattacgacagatatcatgattagagcttcaattcgtgccagttcgaggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2805 accgaacatatattacgacagatatcatgattagagcttcaattcgtgccagttcgaggg 2746
Query: 121 tttctagccgtttacttgcttgtaagaactgttatgtccctgtctcacaaagaatcacta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2745 tttctagccgtttacttgcttgtaagaactgttatgtccctgtctcacaaagaatcacta 2686
Query: 181 gtgcgttggtatcaggatccgctgttaataacaacattagattctactcggataaacctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2685 gtgcgttggtatcaggatccgctgttaataacaacattagattctactcggataaacctc 2626
Query: 241 aaccaaagttgactgttgagaattatccaaacattaaacgtttggaatcattcaagaagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2625 aaccaaagttgactgttgagaattatccaaacattaaacgtttggaatcattcaagaagt 2566
Query: 301 tgggtaaggaagatctagactatttcaaaaccattctctctcaacaagagatcttggaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2565 tgggtaaggaagatctagactatttcaaaaccattctctctcaacaagagatcttggaag 2506
Query: 361 cgaatgamaacgaagacttggctttttataatgaagattggatgaggaaatacagaggcc 420
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2505 cgaatgaaaacgaagacttggctttttataatgaagattggatgaggaaatacagaggcc 2446
Query: 421 aatccaaactagttctaagaccaaagactactgaacaagtttcaaagatcttgaaatact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2445 aatccaaactagttctaagaccaaagactactgaacaagtttcaaagatcttgaaatact 2386
Query: 481 gtaatgaacaaaacttagctgttgtaccacaaggtggtaacactggtcttgttggtggct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2385 gtaatgaacaaaacttagctgttgtaccacaaggtggtaacactggtcttgttggtggct 2326
Query: 541 ctgtaccagtcttcgacgaaattgtgttgagtttgactcagttgaacaagattagagaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2325 ctgtaccagtcttcgacgaaattgtgttgagtttgactcagttgaacaagattagagaat 2266
Query: 601 tcgacgaagtctctggtattttgamatgtgatgctggtgtcatcttggaagccgctgata 660
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2265 tcgacgaagtctctggtattttgaaatgtgatgctggtgtcatcttggaagccgctgata 2206
Query: 661 tgttcttggcagaacgtggctacattttcccaatggacctgggcgccaaaggctcctgtc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2205 tgttcttggcagaacgtggctacattttcccaatggacctgggcgccaaaggctcctgtc 2146
Query: 721 atgttggtggtatagtagccactaacgctggtgggctaagattattacgttatggctcat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2145 atgttggtggtatagtagccactaacgctggtgggctaagattattacgttatggctcat 2086
Query: 781 tgcatggaacagtattgggcctagaggtagtgctaccaaacggggagatcgttaacagta 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2085 tgcatggaacagtattgggcctagaggtagtgctaccaaacggggagatcgttaacagta 2026
Query: 841 tgaacgctttgagaaaagataatactggctatgatctaaaacaattatttatcggatctg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2025 tgaacgctttgagaaaagataatactggctatgatctaaaacaattatttatcggatctg 1966
Query: 901 aaggtaccatcggtgttgttactggtg-ttycatcttgtgt-cmattaggcc-aatgcat 957
||||||||||||||||||||||||||| || |||||||||| | |||||||| |||||||
Sbjct: 1965 aaggtaccatcggtgttgttactggtgtttccatcttgtgtccaattaggccaaatgcat 1906
Query: 958 ttaatgtctcattcttaggtgttgaaagttacg-agctgttcaaaaagttttcgttcaag 1016
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1905 ttaatgtctcattcttaggtgttgaaagttacgaagctgttcaaaaagttttcgttcaag 1846
Query: 1017 ccaagaaggagctgggtgagattttgtcagccttttgaattcactggatkttaaatctca 1076
|||||||||||||||||||||||||||||||| |||||||||| ||||| | ||||||||
Sbjct: 1845 ccaagaaggagctgggtgagattttgtcagcc-tttgaattca-tggatttgaaatctca 1788
Query: 1077 aaa 1079
|||
Sbjct: 1787 aaa 1785
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7333
Number of Sequences: 1807
Number of extensions: 7333
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 1086
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1070
effective length of database: 10,329,639
effective search space: 11052713730
effective search space used: 11052713730
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)